Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVGKLVFNQSEPTEFVFRAFTTATEFQVLLFLLFLLLYLMILCGNTAIIWVVCTHSTLRTPMYFFLSNLSFLELCYTTVVVPLMLSNILGAQKPISLAGCGAQMFFFVTLGSTDCFLLAIMAYDRYVAICHPLHYTLIMTRELCTQMLGGALGLALFPSLQLTALIFTLPFCGHHQEINHFLCDVPPVLRLACADIRVHQAVLYVVSILVLTIPFLLICVSYVFITCAILSIRSAEGRRRAFSTCSFHLTVVLLQYGCCSLVYLRPRS----ST--S---ED-ED--SQIALVYTFVTPLLNPLLYSLRNKDVKGALRSAIIRKAASDAN |
| 2LNL Chain:A ((39-323)) | ---------------------------KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFLFRQA--Y-H--PNNSSPVCYEVLGN---DT-AKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAH-MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218426 for 1980 contacts (-110.3/contact) +
2D Compatibility (PS) -27100 + (NN) -3485 + (LL) 3204
1D Compatibility (HY) -24000 + (ID) 2300
Total energy: -272107.0 ( -137.43 by residue)
QMean score : 0.149
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