Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANVTLVTGFLLMGFSNIQKLRILYGVLFLLIYLAALMSNLLIITLITLDVKLQTPMYFFLKNLSFLDVFLVSVPIPKFIVNNLTHNNSISILGCAFQLLLMTSFSAGEIFILTAMSYDRYVAICCPLNYEVIMNTGVCVLMASVSWAIGGLFGTAYTAGTFSMPFCGSSVIPQFFCDVPSLLRISCSETL-MVIYAGIGVGACLSISCFICIVISYIYIFSTVLKIPTTK-----------GQSKAFSTCFPHLTVFTVFIITAYFVYLKPPSNSPS---V-ID--RLLSVIYTVMPPVFNPVTYSLRNNDMKCALIRLLQKTYGQEAYFI |
| 2KS9 Chain:A ((34-325)) | -----------------------LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTETM-----PSRVVCMIEWPE----HPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247726 for 2134 contacts (-116.1/contact) +
2D Compatibility (PS) -27367 + (NN) -6269 + (LL) 2940
1D Compatibility (HY) -22000 + (ID) 2100
Total energy: -302522.0 ( -141.76 by residue)
QMean score : 0.213
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