Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQPESGANGTVIAEFILLGLLEAPGLQPVVFVLFLFAYLVTVRGNLSILAAVLVEPKLHTPMYFFLGNLSVLDVGCISVTVPSMLSRLLSRKRAVPCGACLTQLFFFHLFVGVDCFLLTAMAYDRFLAICRPLTYSTRMSQTVQRMLVAASWACAFTNALTHTVAMSTLNFCGPNVINHFYCDLPQLFQLSCSSTQLNELLLFAVGFIMAGTPMALIVISYIHVAAAVLRIRSV-----------EGRKKAFSTCGSHLTVVAIFYGSGIFNYMRLGSTK------LSDKDKAVGIFNTVINPMLNPIIYSFRNPDVQSAIWRMLTGRRSLA |
2KS9 Chain:A ((33-324)) | ---------------------------VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTT-ET----MPSRVVCMIEWPEH---PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFIS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210529 for 2172 contacts (-96.9/contact) +
2D Compatibility (PS) -27659 + (NN) -5815 + (LL) 2132
1D Compatibility (HY) -20000 + (ID) 2200
Total energy: -264071.0 ( -121.58 by residue)
QMean score : 0.261
|
|
|