Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAERNYTVVTEFFLTAFTEHLQWRVPLFLIFLSFYLATMLGNTGMILLIRGDRRLHTPMYFFLSHLSLVDICYSSAIIPQMLAVLW-EHGTTISQARCAAQFFLFTFFASIDCYLLAIMAYDRYTAVCQPLLYVTI---ITEKARWGLVTGAYVAGFFSAFVRTVTAFTLSFCGNNEINFIFCDLPPLLKLSCGDSYTQEVVIIVFALFVMPACILVILVSYLFIIVAILQIHSAGGRAKTFSTCASHLTAVALFFGTLIFMYLRDNTGQSSEGDRVVSVLYTVVTPMLNPLIYSLRNKEVKEATRKALSKSKPARRP
3PBL Chain:A ((41-226))--------------------------YALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNT-------TGDPTVCSI----------SN--PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKL


General information:
TITO was launched using:
RESULT:

Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192239 for 1246 contacts (-154.3/contact) +
2D Compatibility (PS) -18396 + (NN) -4066 + (LL) 3000
1D Compatibility (HY) -14800 + (ID) 1750
Total energy: -228251.0 ( -183.19 by residue)
QMean score : 0.283

(partial model without unconserved sides chains):
PDB file : Tito_3PBL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PBL-query.scw
PDB file : Tito_Scwrl_3PBL.pdb: