Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMCFLLIISSI-------LVVFAFVLGNVANGFIAL----------------------VNVIDWVNTRKISS------------------AEQILT--ALVVSRI---------------------------GLLWVMLFLWYATVFNSALYGLEVRIVASNAWAVTNHFS---------MWLAASLSIFCLL--KIANFSNLISLHLKKRIKSVVLVILLGPLVFLICNLAVITMDERVWTKEYEGNVTWK-----IKLRNAIHLSSLTVTTLANLIPFTLSLICFLLLICSLCKHLKKMRLHSKGSQDPSTKVHIKALQTVTSFLMLFAIYFL---CIITSTWNLRTQQSK----------LVLLLCQTVAIMYPSFHS-----FILIMGSRKLKQTFLSVLWQMTR---- |
| 1OCK Chain:A ((1-412)) | MISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQASGPLRGIAVGIKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKTTTTAFASRDPTATLNPHNTGHSPGGSSSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKPSFRMLPTVGVKCYSWALDTVGLFGARAEDLARGLLAMTGRSEFSGI-VPAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASVQAIDLPEAVHEAWRIHPIIQDFEAHRALAWEFSEHHDEIAPMLRASLDATVGLTPKEYDEARRIGRRGRRELGEVFEGVDVLLTYSAPGTAPAKALASTGDPRYNRLWTLMGNPCVNVPVLKVGGLPIGVQVIARFGNDAHALATAWFLEDALAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -351892 for 2455 contacts (-143.3/contact) +
2D Compatibility (PS) -30936 + (NN) -5375 + (LL) 176
1D Compatibility (HY) 13600 + (ID) 1300
Total energy: -375727.0 ( -153.05 by residue)
QMean score : 0.259
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