Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITFLPIIFSILIVVTFVIGNFANGFIALVNSIEWFKRQ-------KISFADQILTALAVSRVGLLWVLVLNWYATELN---PAFNSIEVRITAYNVWAVINHFSNWLATSLSIFYLLKIANFSNL----------IFLHLKRRVKSVVLVILLGPLLFLVCHLFVINMNQIIWTKEYEGNMTWKIKLRSAMYLSNTTVTILANLVPFTLTLISFLLLICSLCKHLKKMQLHGKGSQDPSMKVHIKALQTVTSFLLLCAIYFLSIIMSVWSFESLENKPVFMFCEAIAFSYPSTHPFILIWGNKKLKQTF----LSVLWHVRYWVKGEKPSSS |
| 1N2S Chain:A ((1-298)) | ----------MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALN--------------------KPEVAGLYHL-VAGGTTTWHDYAALVFDEARKAGITLALTELNAV----PTSAYPTPASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286599 for 2317 contacts (-123.7/contact) +
2D Compatibility (PS) -28633 + (NN) -972 + (LL) 3408
1D Compatibility (HY) 6400 + (ID) 1500
Total energy: -307896.0 ( -132.89 by residue)
QMean score : 0.223
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