Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLL---------LSCLAVSR-------IFLQLFIFYVNVI-------------------------VIFFIEFIMCSANCAILLFI----NELELWLATWLGVFYCAKVASVRHPLFIWL------KMRISKLVPWMILGSLLYVSMICVFHSKYAGFMVPYFLRKFFSQNATIQKEDTLAIQIFSFVAEFSVPLLIFLFAVLL--------LIFSLGRHTRQMRNT--VAGSRVPGRGAPI----------SALLSILSFLILYFSHCMIKVFLSSLKFHIRRFIFLFFILVI-------GIYPSGH--------SLILILGNPKLKQNAKKFLLHSKCCQ----------- |
4R33 Chain:A ((35-418)) | ---GDFVLPELEDVRAEAATVDTRAVLALAEGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGARRPRLHTFVPLYTTNYCDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFNIGSMEQDEIDVLGEWIGREDP---VTMCVFQESYD----RETYRRFMGKTSVGVPKADFDRRVVSFDRWLDAGYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPE--QRLVLTTREPQEFQDVALGLAGVISPGSPDVAPYRAGCEARNDEKSSQFLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343658 for 2161 contacts (-159.0/contact) +
2D Compatibility (PS) -31054 + (NN) -13247 + (LL) 1572
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -393887.0 ( -182.27 by residue)
QMean score : 0.147
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