Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILT---------SLAISRICLLCVILLDCFILVLYPDVYATGKEMRIIDF-FWTLTNHLSIWFATCLSIYYFFKIGNFF---HPLFLWMKWRIDRVISWILLGCVVLSVFISLPATENLNADFRFCVKAKRKTNLTWSCRVNKTQHASTKL------FLNLATLLPFCVCLMSF----FLLILSLRRHIRRMQLSATGCRDPSTEAHVRALKAVISFLLLFIAYYL----SFLI-----ATSSYFMPETELAVIFGESIALIYPSSHSFILILGNNKLRHA-SLKVIWKVMSILKGRKFQQHKQI |
| 4ID9 Chain:A ((21-341)) | ---------MILVTG--SAGRVGRAVVAALRT----QGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN-------------SPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALT--GLPIVTVDFPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ID9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272756 for 2298 contacts (-118.7/contact) +
2D Compatibility (PS) -29384 + (NN) 2296 + (LL) 3640
1D Compatibility (HY) -400 + (ID) 2300
Total energy: -298904.0 ( -130.07 by residue)
QMean score : 0.187
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