Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTVDYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFLWLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSKIPYFEPLTLFNLFAIV--------PFIVSLISFFLLVRSLWRHTKQIKLYATGSRDPSTEVHVRAIKTMTSFIFFFFLYYISSILMTFSYLMTKYKLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
4R0G Chain:A ((1-258)) | MLSS---------TKEYLQALRDGKYLLFLQWPKFIAEY------------------------------------YGQEADEMVSLLIFEWLNNG--FCLDDIKKFAILYAVHEMESRPLREGLSYALTTISIALFPCMVYLTNNLQEHYITSKKLSSKEVLQLMTMNNAYLEKQRFVEFLGQEQDKFFTWVKEADSSAVSKAFDQIYSVTYLKYLIEDYLSLLESAHLPTDQLKSSRISLVVRLAKYLH--------------EQTELTQDVHDEIAVYVKKLWEMQPAEFEEEFLKKISPLPFIDNTVRILT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249186 for 1734 contacts (-143.7/contact) +
2D Compatibility (PS) -24968 + (NN) -5333 + (LL) 7060
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -281527.0 ( -162.36 by residue)
QMean score : 0.325
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