Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGDTLKLLSPLMTRYFFLLFYSTDSSDLNENQHPLDFDEMAFGKVKSG----------ISFLIQTGVGILGNSFLLCFYNLIL---FTGHKLRPT--DLILSQLALAN---SMVLFF--KGIPQT--MAAFGLKYLLNDTGCKFVFYYHRVGTRVSLSTICLLNG-FQAIKLNPSICRWMEIKIRSPRFIDFCCLLCWAPH-----VLMNASVLLLVNGPLNSKNSSAKNNYGYCSYKASKRFSSLHAVLYFSPDFMSLGFMVWASGS--------MVFFLYRHKQQVQHNHSNRLSCRPSQEARATHTIMVLVSSFFVFYSVHSFLTIWTTVVANPGQWIVTNSVLVASC---FPAR-----SPFVLIMSDTHISQFCFACRTRKTLFPNLVVMP |
| 3FHC Chain:A ((9-405)) | ---IPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAQKRPFAYHKLLKDAGGM-VIDMKWNPTVPSMVAVCLADGSIAVLQVTET----VKVCATLPSTVA-VTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCP-----PFYESDHPVRVLDVLWIGTYVFAIVYAA-ADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLMLLSTDGVLCPFYMIN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268070 for 2599 contacts (-103.1/contact) +
2D Compatibility (PS) -36378 + (NN) -4980 + (LL) 1012
1D Compatibility (HY) -16400 + (ID) 2950
Total energy: -327766.0 ( -126.11 by residue)
QMean score : 0.191
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