Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNIKTISVKDNNVRLDRYIRRIFPNLKQSVIEKSLRRGLIKVNDCKAKSSDRVNSGQIITIKYLDYIENANSDCKHNEKLVELLRSNILYEDEYILAINKPAGVIVQGGIKV-KISISDLLDQVREGETFKIVHRLDRDTSGAIIFARNANVARYLMEEFKGRRVKKTYLALTSGIPSKNRGVIDYPLVKK-YVSGQEKVVIDKNSPQDATTRFSIIAK-FKLNKPLVQRPIIQVADTQLYEHCNLSLSRVCHLSSLSSCYSSALLCHLSAPILVSSKTDHKQAHYTTFSIKKLDSSIMCRNDTRSVAYLKLQPITGRTHQLRTHLAYINCPILGDGKYGGKKAFVDGIASKIHLHSYSLSLKLPNNKKITITAPLPEHIKKSIEALHTPF |
| 2OML Chain:A ((8-173)) | ------------------------------------------------------------------------------------------NQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIP----VQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGK--RTGKIYYVQVEGIPTQD--ALEA-LRNGVTLNDG-P---TLPAGAELVDEPAWLWPRNPP---------------------------------------------------------------------------IR-RKSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREVTD-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50032 for 1144 contacts (-43.7/contact) +
2D Compatibility (PS) -16755 + (NN) -33 + (LL) 14408
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -57162.0 ( -49.97 by residue)
QMean score : 0.360
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