Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKYLKAAIYLSLLIYIYISVFSYSYKDISLNTVTDKEVTNLGGIVGSYLADILVQFLGLTSITVATTIICFLIFRPSKRLLKVLYSVLINLGICAMLPQLSLGITARYMHSGIIGNILINNCPFYIFIIATSTGIVGLIGWKRTIYLLFLLYKKVASLLAKVLFFRLYKAAEYPTPPLVVEEKHRAQITTRQQPKERQKKVIGEIFESSSEFKFPSIHLLSKAEESLQRKRLNEMESNKNLSLLEQVLSDFGVQGKVISVCYGPVVTLYKLEPQAGTKSARVIGLADDIARSMSALSARISIIRGQNAMGIELPNKEREIVMLRDLLESLEYQNANLNLPIALGKEISGKPVIADLAKMPHLLVAGTTGSGKSVAINTMILSLIYRLSPDACKMIMIDPKMLELSIYDAIPHLITPVVTEPKKAVIALKWIVKEMENRYRMMSYLNVRNVINYNQKITEAINSGIELERVVQVGFNSTTGKPLFEKMPIKMETFSYIVVIVDEMADLMLVAGKEIECSIQRLAQMARAAGIHIIMATQRPSVDVITGVIKANFPTRISFAVTSKIDSRTILGEQGAEQLLGMGDMLYMASGGKIIRVHGPFVSDEEVQNIVDHLKMQGEPNYMEEITKEDENSSAELKGETEGEEND-LYKQAVAIIQRDQKVSTSYIQRQLRIGYNRAANIVERTEKEGIISAPNYLGKREILVE |
| 2VE9 Chain:D ((9-67)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPLYDEAVRFVTESRRASISAVQRKLKIGYNRAARMIEAMEMAGVVTPMNTNGSREVIAP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29075 for 391 contacts (-74.4/contact) +
2D Compatibility (PS) -6159 + (NN) 39 + (LL) 52588
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: 12193.0 ( 31.18 by residue)
QMean score : 0.722
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