Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLVAPR-QFDVTYNNVD-IYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPMSLVHEAVGEVVFDSKG--VFEKGTKVVMVPNTPTEQH---HIIAENYLASSYFRSS-------------------------GYDGFMQDYVVMAHDRIVPLPNDIDLSTIS-YTELVSVSYHAIQRFERKSIPLKNSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFS--FVDDIFTVNQ-----------IPDDLKIDHAFECVGGKGSQVALQQIVEHISPE-GSIALLGVSELPVEVNTRLVLEKGLTLIGSSRS---GSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTSWGKTVLKWTI |
| 1E3I Chain:A ((7-374)) | IKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-----ALFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAK--VTPGSTCAVFGLGCVGLSAIIGCKI-AGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELT-AGGVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVI-LGRSINGTFFGGWKSVDSVPNLVSDYK-NKKF--DLDLLVTHAL---PFESINDAIDLMKEGKSIRTIL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E3I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230166 for 2796 contacts (-82.3/contact) +
2D Compatibility (PS) -34359 + (NN) -9214 + (LL) 1600
1D Compatibility (HY) -7200 + (ID) 2550
Total energy: -281889.0 ( -100.82 by residue)
QMean score : 0.372
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