Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEALKDSILGALEMVIDPELGIDIVNLGLVYKVNVD-DEGVCTVDMTLTSMGCPMGPQIIDQVKTVLAEIPEIQDTEVNIVWSPPWTKDMMSRYAKIALGVS
1UWD Chain:A ((4-103))
-KKVTKEDVLNALKNVIDFELGLDVVSLGLVYDIQIDDQ-NNVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELTFDPPWTPERMSPELREKFGV-
General information:
TITO was launched using:
RESULT:
Template:
1UWD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82308 for 671 contacts (-122.7/contact) +
2D Compatibility (PS) -9832 + (NN) 1655 + (LL) 284
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -101201.0 ( -150.82 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1UWD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UWD-query.scw
PDB file :
Tito_Scwrl_1UWD.pdb
: