Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSKKFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKKQVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK--VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVE-GIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLK--DIPEEEREQLHTDREDGIYVAK-----ADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQKEQPKRQSRSERQSPGQGDRDFFR |
| 3STJ Chain:D ((14-331)) | -----------------------------------------------------------------------------------SLAPMLEKVLPAVVSVRVEGT-------------QPFE-GLGSGVI--INASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSDKLRVGDFAVAVGNPFGL--GQTATSGIVSALGR------SGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKR-----GLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRI-ATTEPGTKVKLGLLRNGKPLEVEVTL--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92038 for 2452 contacts (-37.5/contact) +
2D Compatibility (PS) -30981 + (NN) -11064 + (LL) 6312
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -156921.0 ( -64.00 by residue)
QMean score : 0.529
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