Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIETFKAFVIDKDESGKVTPTFKQLSPTDLPKGDVLIKVHYSGINYKDALATQDHNAVVKSYPMIPGIDLAGTIVESE--APGFEKGEQVIVTSYDLGVSHYGGFSEYARVKSEWIIKLPDTLTLEESMIYGTAGYTAGLAIERLEKVGMNIEDGP-VLVRGASGGVGTLAVLMLNELGYKVIASTGKQDVS----DQLLELGAKEVIDRLPVE-DDHKK-PLASSTWQACVDPVGGEGINYVTKRLNHSGSIAVIGMTAGNTYTNSVFPHILRGVNILGIDSVFT----AMKLRQRVWRRLAKDLKPENL-HEIKQVITFDELPEQLNKVINHENKGRIVIDFGVDK |
| 1ZSY Chain:A ((23-357)) | MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANA-----GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQ----LQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131966 for 2639 contacts (-50.0/contact) +
2D Compatibility (PS) -34828 + (NN) -12324 + (LL) 248
1D Compatibility (HY) -12800 + (ID) 2950
Total energy: -194620.0 ( -73.75 by residue)
QMean score : 0.501
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