Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVFLLLFMLGGLEAHSDYCSDHCEGTPDSRIPPMGFHFSFVHSVKYYLQDPQKRDHKLEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQAQKETP
1TBA Chain:A ((11-77))
--------------------------EGSIGNGLDLTGILFGNIDSEGRLLQDDDGEGRG----GTGFDAELRENIGSLS---KLGLDSMLLEVIDLKEA
General information:
TITO was launched using:
RESULT:
Template:
1TBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2522 for 384 contacts (6.6/contact) +
2D Compatibility (PS) -6844 + (NN) -3282 + (LL) 2720
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -8084.0 ( -21.05 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_1TBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TBA-query.scw
PDB file :
Tito_Scwrl_1TBA.pdb
: