Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADTINTTETTHETKKPNAFVNFFKNNLTDKRYDSLGLIGAGVLCCVLSGAMGIVGIIFVAIGIFLSFSNINLVKLVEKLSKKQPKAATTVNNETQKSQAASVTNEPTEAKETKD
1Y04 Chain:A ((1-35))-------------------------------------------------------------------------------GSMNAPARAAAKTAADALAAAKKTAADAAAAAAAA-


General information:
TITO was launched using:
RESULT:

Template: 1Y04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12391 for 143 contacts (86.7/contact) +
2D Compatibility (PS) -3606 + (NN) 1354 + (LL) 5400
1D Compatibility (HY) 1200 + (ID) 250
Total energy: 16489.0 ( 115.31 by residue)
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_1Y04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y04-query.scw
PDB file : Tito_Scwrl_1Y04.pdb: