Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTFEPYPFERLRALFKEITPKKKGLDLGIGEPRFETPKFIQDALKSHTHSLNIYPKSAFEESLREAQRGFFKRRF-KIELKEN-ELVSTLGSREVLFNFPSFVLFDYP--NPTIAYPNPFYQIYEGSAQFARAKSLLMPLVKENDF--T-PSLNEKELQEVDLVILNSPNNPTGRTLSLEELIAWVKLALKHDFILINDECYSEIYENTP-PSSLLEACMLADNGAFKNVLVIHSLSKRSSAPGLRSGFIAGDSSLLEKYKAFRTYLGYTSANAIQKASEVAWLDDRHAEFFRNIYANNLKLARKIFKE---TLIYPYSFYAYLPVKD--GENFAKTLYQNEGITTLPALYLGRNH----IGADYVRLALVYDTSLLEKPLEIIEAYRENYA |
| 3JTX Chain:A ((27-395)) | ------------------PEGMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNP--GIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPA-PSFNPDWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQ-LGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVSLYR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JTX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166904 for 3003 contacts (-55.6/contact) +
2D Compatibility (PS) -38362 + (NN) -22409 + (LL) 2060
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -255865.0 ( -85.20 by residue)
QMean score : 0.471
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