Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------------------------------------MKRHVIAFGLKIEILKKYKRTLQAH---DDLRQLEPLGFENTQGSVYLKDQ-------------
1WF9 Chain:A ((1-107))
GSSGSSGTMLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGS-MVYLAYEGERTIRGSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1WF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8814 for 231 contacts (-38.2/contact) +
2D Compatibility (PS) -4781 + (NN) 2163 + (LL) -172
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -13954.0 ( -60.41 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1WF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WF9-query.scw
PDB file :
Tito_Scwrl_1WF9.pdb
: