Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDFSSLLLKLQEYWKDQGCLVIQPYDIPAGAGTFHPATLLRSLDKKPWNVAYVAPSRRPTDGRYGENP---NRLGSYYQFQVVIKPSP---------SNIQELYLKSLEVLGINLNEHDIRFVEDNWESPTLGAWG---LGWEVWLDG----MEVTQFTY---F----------QQVGGIPCSPIP-VEITYGLERLTMYVQKVENILEIEWAKKDNESVRYAQVHLESEYEFSKYHFEVASVERLLEMFKNAQAEALHCLENKLPLPAYDLVMLCSHFFNILDARKAISVAERQNYILQIRDLAKGCAVLYKEQEEEREERLKNALTKA |
| 3ERR Chain:A ((352-500)) | ---------------------------------------------ALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP-----YRLVEVA--TGDMGPGKWRQVDIEVYLPSEGRYRETHSCSALLDWQARRANLRYRDPEG-RVRYAYTLNNTALATPRILAMLLENHQLQDGRVRVPQALIPYMGKEVLEPG---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ERR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43502 for 675 contacts (-64.4/contact) +
2D Compatibility (PS) -12930 + (NN) -3747 + (LL) 12944
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -53485.0 ( -79.24 by residue)
QMean score : 0.407
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