Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MKKFLSILSILVLALLVTACGS---DSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVG-DNLRKVD----QKMVYPLTALGLESGANLDDA----------------TKKQLEEQVASQYSAYKESKGASLETKFTDEALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFEAQGFKKKES--------------- |
| 4O6Y Chain:A ((10-219)) | PIFMVVRVLGFIIAALVLTWTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAAGFVTYW-YPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYSTEAMLVNTMGVLILILGGFVILGVVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 44741 for 1105 contacts (40.5/contact) +
2D Compatibility (PS) -17738 + (NN) -8043 + (LL) 104
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: 10364.0 ( 9.38 by residue)
QMean score : 0.193
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