Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQKNTIQKVYGGVVSVYNNPEEIRPFENRDTENHLEKQLIGKAAADFIEENDLIFIDSGTTTSCLAAALPTD------KEITIITNSLDVINFASEMDNVKLIVIGSTFKPSTKSFVGVENWGFFEKYNITKAFMAATALSTAHGVMNSDILEYEIKRHMM-EKATAKFLLVDHTKVDKSALLTYGELAEFDWLVTSKDIAGGCLGYCEDVGVLVRLV |
2F8M Chain:A ((11-135)) | ---------------------------------------------------------------------------SLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTELKARK-LGIPLTTLEKH-------------------SNIDITIDGTDEIDLN-LNLIKGRGGALVREKLVASSSSLLIIIGDESKLCT--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75324 for 908 contacts (-83.0/contact) +
2D Compatibility (PS) -12930 + (NN) -3100 + (LL) 9212
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -87842.0 ( -96.74 by residue)
QMean score : 0.424
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