Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKLLRKPLNERIAPGVTLVQDINQGNSPLSYVGFRLIELEEDAVYQE-TLDGLECCIVALTGKISVSEGDHVFSEIGTRANVFEKIPTDSVFISGGRAFQVKADAEKARVALCYSPADR--------------NLPTTLIKASDNS------------IE--QRGK------------Y--Q-------NKR-------LVHNILPDVSEVASSLLVVEVYTDGGNFSSYPPHKHDHDNLPAESLLEESYYHEINPKQGFIFQRVYTDDRALDETMAVEHQNAVIVPEG-YHPVGVPDGYDSYYLNVMAGPKRVWEFHNDPDHEWILERD |
| 1Y3T Chain:A ((47-294)) | ---------------------------------EIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLDGERY-LL-------IS--GDYANIPAGTPHSYRMQSHRTRLVSYTMKGNVAHLYSVIGNPYDHAEHPPYASEEVSNERFAEAAAVATIVFLDEAKPACSAKLAELTELPDGAVPYVLESGEGDRLLTGDQLHRIVAAQK-NTDGQFIVVSSEGPKGD--RIVDHYHEYHT--------ETF-YCL---EGQMTMWTDG------QEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69270 for 1335 contacts (-51.9/contact) +
2D Compatibility (PS) -21064 + (NN) -7277 + (LL) 4304
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -98007.0 ( -73.41 by residue)
QMean score : 0.397
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