Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIPYRLNNKGGLIVTLPGKDETKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIEGEYCTIETSAGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRALGIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENNLELPHTTHFLISNNEEIGYGGNSNIPA--ETVEYLAVDMGALGDG---QTSDEYTVSICAKDGSGPYHLGLRKHLVELAKKNNIDYKVDIYPFYASDASAAINAGNDIIHGLIGPGIDASHA-YERTHRDSLYHTEKLVYAYLFSNILK |
| 2WYR Chain:A ((2-332)) | -------MSMIEKLKKFTQIPGISGYEERIREEIIREIKDFA-DYKVDAIGNLIVELGE--GEERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKG-ILDGVIGA--TPPHL-----KSVIPWYDLV--IDIGAESKEEALE-LVKPLDFAVFKKHFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDH--ELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGVT-GGGTDASAFQD---RSKTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124247 for 2790 contacts (-44.5/contact) +
2D Compatibility (PS) -33888 + (NN) -7096 + (LL) 1268
1D Compatibility (HY) -17200 + (ID) 3850
Total energy: -185013.0 ( -66.31 by residue)
QMean score : 0.445
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