Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------LHKLSVVIAVYN-VSEYIEACLTSVLEQNYKN--VELIIVNDGSTDDTF-QKVEKLVDGHTN--VILIDQENQGVSAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKMMDSFEMSDADMVTIGVARLSGDKVYPST-------------LHERYMVEKKEATTIEETPALLYDTTSWNK---VFKKSFWDKHHLEFPEGQMY--EDIALMIPAFLYAEKVNIIPDVGYYWRSREGGAKSITQRRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAP-KDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK------------------------------------------------------------------------ |
| 1XHB Chain:A ((8-466)) | NRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFG--QIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRRKLQ---CKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGG--NQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCTGSRSQQWLLRNV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102968 for 2500 contacts (-41.2/contact) +
2D Compatibility (PS) -35129 + (NN) -10242 + (LL) 544
1D Compatibility (HY) -10800 + (ID) 1950
Total energy: -160545.0 ( -64.22 by residue)
QMean score : 0.281
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