Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGASAIGILTITPSEASIIASDIATKSGDVRIGFID-----RFSGSVVLTGDVSSVESALQQVVFSLHEILDFSIPKITRS
3GFH Chain:A ((119-212))
---------------AQDTAFLAHVVSRTGSYLSSTAGITL-GDPMAYLVAPPLE-ATYGIDAALKSADVQLATYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIA----------
General information:
TITO was launched using:
RESULT:
Template:
3GFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55633 for 681 contacts (-81.7/contact) +
2D Compatibility (PS) -9387 + (NN) -3459 + (LL) 1708
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -70121.0 ( -102.97 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3GFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GFH-query.scw
PDB file :
Tito_Scwrl_3GFH.pdb
: