Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDGALKATCLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFIH |
1HD8 Chain:A ((3-262)) | ----------LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG--------------------NLKPGMQVPVSQ-LIRDINLQSGNDACVAMADFAAG---------SQDAFVGLMNSYVNALGLKNTHFQTVHGL---DADGQYSSARDMALIGQALIRD-------------------------VPNEYSIYKEKEFTFN-----G-----IRQL-----------NRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKGREAESKKLLTWGFRF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43651 for 2068 contacts (-21.1/contact) +
2D Compatibility (PS) -25696 + (NN) -1884 + (LL) 8576
1D Compatibility (HY) -1600 + (ID) 1450
Total energy: -65705.0 ( -31.77 by residue)
QMean score : 0.225
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