Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLG-SIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDDSTYLGIVDGKGADLYALGKLLQEELGEQIAIGSSPQMLAKLSREFVDIMNARFEVIKQNSSLNADAYDLEMTPNF------------------------------LFVDELASIRDSCGSSKQGKELWNEILQNLGLIARKGRQAGCHLLLSTQDPNAENIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVSDRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNI-LPNY------ |
| 2IUT Chain:A ((70-477)) | --LPPLSLLDPAEVKQKSYSPESLEAMSRLLEIKLKE--FGVEVSVDSVHPGPVITRFEIQPAAGVKVSRISNLAKDLARSLAVI--------SVRVVEV----IPGKTTVGIEIPNEDRQMVRFSEVLS--SPEYDEHKSTVPLALGHDIGGRPIITD-------------------------------------------LAKMPHLLVAGTTGSGKSVGVNAMLLSILFKS--TPSEARLIMIDPKMLELSIYEGIPHL-LCPVV---TDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVG---------KKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLL----GHGDMLYLPPGTGLPIRVHG--AFVSDDEVHRVVEAWKLRGAPDYIEDILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220300 for 3096 contacts (-71.2/contact) +
2D Compatibility (PS) -39744 + (NN) -12026 + (LL) 6328
1D Compatibility (HY) -12400 + (ID) 3350
Total energy: -281492.0 ( -90.92 by residue)
QMean score : 0.378
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