Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKIILSIATIAATASLAV---SVQASEKVELKVATDSDTAPFTYQK-DGKFKGYDVDVVKAVFKGS---KYKVTFKTVPFDTISTGIDAGKFDLSANDFSYNKERAEKYLFSDPISRSNYAVVGKKGSHYKSLSDLSGKSTEVLSGVNYAQVLENWNKNHPNKKPIKIKYVSGTTGVTSRLKNIESGKIDFILYDAISSDYIVKDQSLNLSVSPLKGKIGNNKDGLEY-LLLPKDKKGKTLQKFINKRIKVLKENGTLARLSKQYFGGDYVSNIDK |
| 2YJP Chain:A ((45-282)) | --------------------AATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKNKPITDMAQLKDQTLLVNKGTTADAFFTKSH---P---EVKLLKFD-Q--NTETFDALKDGRGVALAHDNALLWAWAKENP-NFEV--AIGN---LGPAEFIAPAVQKGN--ADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKVKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59780 for 1898 contacts (-31.5/contact) +
2D Compatibility (PS) -24956 + (NN) -7770 + (LL) 2232
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -98024.0 ( -51.65 by residue)
QMean score : 0.465
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