Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------MNQFILTGGWSWYNNLVSQVPAGKLFSWKAVLDAIPSILER---LPITLLLTVAGALFGLILALIFAVVKINRVKILYPIQALFVSFLRG---------TPILVQLMLSYYGIPLFLKFLNQKYGFDWNINAIPASVF--------AITAFAFNEAAYTSETIRAAILSVDQGE-----------------------IEAARSLGMTSAQVYRRVIIPN--AAVVATPTLINTLIGLTKGTSLAFNAGIVEMFA-------------------QAQIMGGSDYRYFERYISVA---------LVYWAVSFLIEQLGNAIERKMAIKAPRHLTDEIPGGVR |
| 1Q9J Chain:A ((1-418)) | MFPGSVIRKLSHSEEVFAQYEVFTSMTIQLRGVIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAERFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123215 for 1682 contacts (-73.3/contact) +
2D Compatibility (PS) -27658 + (NN) 4506 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 2500
Total energy: -152067.0 ( -90.41 by residue)
QMean score : 0.025
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