Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSERGLLIVFSGPSGVGKGTVRQEIFST-PDHKFDYSVSMTTRPQRPGEVDGVDYFFRTREEFEALIKEGQMLEYAEYVGNYYGTPLSYVNETLDKGIDVFLEIEVQGALQVKSKVPDGVFIFLTPPDLEELEERLVGRGTDSPEVIAQRIERAKEEIALMREYDYAVVNDQVSLAAERVKRVIEAEHYRVDRVIGRYTNMVKETDKKLS
2F3T Chain:B ((3-203))
---QGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGR---SEEVIAKRMAQAVAEMSHYAEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD--
General information:
TITO was launched using:
RESULT:
Template:
2F3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67383 for 1411 contacts (-47.8/contact) +
2D Compatibility (PS) -22054 + (NN) -13487 + (LL) 64
1D Compatibility (HY) -14400 + (ID) 4250
Total energy: -121510.0 ( -86.12 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_2F3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3T-query.scw
PDB file :
Tito_Scwrl_2F3T.pdb
: