Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIQEIKDLMTQFDESSLREFSFKTSDGELSFSKNEGKAPLVPTMSPMSHQPEATPTIATPVSNEAGEQTKQATEVVSEIPESTVTVAEGDVVESPLVGVAYLASGPDKPNFVSVGDSVKKGQTLMIIEAMKVMNEVPAPHDGVVTEILVANEEVIEFGKGLVRIK
3HBL Chain:D ((1093-1145))
----------------------------------------------------------------------------------------------------------------VSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIE
General information:
TITO was launched using:
RESULT:
Template:
3HBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32196 for 256 contacts (-125.8/contact) +
2D Compatibility (PS) -5277 + (NN) 2872 + (LL) 6036
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -34565.0 ( -135.02 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_3HBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HBL-query.scw
PDB file :
Tito_Scwrl_3HBL.pdb
: