Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQSLNKTVEFQTTGVSYLGMGNKVGKFLVG-DQALEFYNDKNVNDYIQIPWTSINQIGANVSRK-KISRHFEVFTDQ----GKFLFAS-KDSGTILKHARRHIGDDKVVKLPTLIQTILKIFKFKK
2AL6 Chain:A ((271-349))
--------------------------ELAIGPEEGISYLTDKGANPTHLADFNQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQTDDYAEII
General information:
TITO was launched using:
RESULT:
Template:
2AL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26367 for 434 contacts (-60.8/contact) +
2D Compatibility (PS) -7523 + (NN) -917 + (LL) 1436
1D Compatibility (HY) -800 + (ID) 350
Total energy: -34521.0 ( -79.54 by residue)
QMean score : 0.313
(partial model without unconserved sides chains):
PDB file :
Tito_2AL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AL6-query.scw
PDB file :
Tito_Scwrl_2AL6.pdb
: