Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MVVLGKL-PDGIFTLLRFNDEGGQLTHISE-SEALWLTLELAPEKMDCI-----------------
4PWU Chain:A ((3-78))
QQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITPQKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLE
General information:
TITO was launched using:
RESULT:
Template:
4PWU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9690 for 230 contacts (-42.1/contact) +
2D Compatibility (PS) -4842 + (NN) 824 + (LL) 0
1D Compatibility (HY) 0 + (ID) 400
Total energy: -14108.0 ( -61.34 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_4PWU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PWU-query.scw
PDB file :
Tito_Scwrl_4PWU.pdb
: