Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFIPFKKSNKCVVTDELFLEVTWEDGKPPEDDSELLGIIEGLEQQYLD--SFQHSIEESLPYMTFQQAELLFQSLKDAYG---------HFQL-----KKVAI--------------------CHLEGKQAVSEGE---------VFASPFIIDSRYQNLLLP-LIQSIMIGPD--FQSYTYQEKREYFVN----------------------QIYPAYKVS------------LGIQESALPLFPEE-------------------GEQIPLDNTFVANRRVASIPTTSSEPRK-----------------PNSSFSLKKVYLLMGFLA-TLAAGAMVSSVSLHAELSKQQEQVNYLYQEWK-------DIQNLSDKE----HQIDVFSRYFLPNYYSGKK----------ENLSDFLSDGDAKYTVPKEGSLQSVILEKVTYDAKTKHYQLTYVLTIKAKEQLTSVRLEFEVKEQPSRKYGYVVTSEPKETPYLMKN |
| 1ZR6 Chain:A ((3-481)) | --EAEFNSINACLAAADV--EFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMYRVSVDDNNVATIQGGARLGYTALELLDQGNRALSHGTCPAVGVGGHVLGGGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKALQDWAQNTMPRELSMRLEINANALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPG-RGWWIQWDFHGGKNSALAAVSNDETAYAHRDQLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLTKEEAQKLYWR------GNLEKLQAIKAKYD----PEDVFGNVVSVEPIAY------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZR6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 293 for 2386 contacts (0.1/contact) +
2D Compatibility (PS) -34688 + (NN) -4100 + (LL) 2420
1D Compatibility (HY) -14800 + (ID) 3100
Total energy: -53975.0 ( -22.62 by residue)
QMean score : 0.054
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