Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MSKSQTDYFSDDLMADALQAENYLRQSY----TCPLQTIQRGIEQGLQSYLERYRLASPQLKFQIFLFSNFYGEKMKYLLEEGEGEFHV-----
3R66 Chain:A ((7-102))
TTQIEVGPGATNATINFEAGILECYERFSWQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFMDPSAGIEGFEP
General information:
TITO was launched using:
RESULT:
Template:
3R66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4506 for 480 contacts (-9.4/contact) +
2D Compatibility (PS) -9089 + (NN) -2791 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 750
Total energy: -14736.0 ( -30.70 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_3R66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R66-query.scw
PDB file :
Tito_Scwrl_3R66.pdb
: