Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQKNNRLGYFGRQKQAFDDYVFLTKAKMK--AERDYFASEGESDPER--------LAAQKARDQEFLKSLKKVGIGFIAFLLFYAIVRTVLGLW
2JG6 Chain:A ((94-168))
---------------AIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYD
General information:
TITO was launched using:
RESULT:
Template:
2JG6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7770 for 389 contacts (-20.0/contact) +
2D Compatibility (PS) -7064 + (NN) -5208 + (LL) 644
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -22598.0 ( -58.09 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_2JG6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JG6-query.scw
PDB file :
Tito_Scwrl_2JG6.pdb
: