Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGE--TLTIDYMDK-TRHKTVDIPYQTVAKARLAVKL
1Y96 Chain:A ((6-69))
-----------------------------------------------------------------------------------------KKGPLEWQDYIYKEVRVTASE----KNEYKGWVLTTDPVSANIVLVNFLEDGSMSVTGIMGHAVQTVETMNEG
General information:
TITO was launched using:
RESULT:
Template:
1Y96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31906 for 363 contacts (-87.9/contact) +
2D Compatibility (PS) -6367 + (NN) -1354 + (LL) 6176
1D Compatibility (HY) -800 + (ID) 350
Total energy: -34601.0 ( -95.32 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_1Y96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y96-query.scw
PDB file :
Tito_Scwrl_1Y96.pdb
: