Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFSFLPQYWSYFNYGVMVTIMISTCVVFFGTII-------------------GVLIALVKRTNLHFLTILANFY------VWVFRGTP---MVVQIMIAFAWMHFNNLPTISFGVLD-----------LDFTRLLP---GIIIISLNSGAYISEIVRAGIEAVPSGQIEAAYSLGIRPKNTLRYVILPQAFKNILPALGNEFITIIKDSALLQTIGVMELWNGAQSVVTATYSPVAPLLFA---------------------------------------------AFYYLMLTTILSALLKQMEKYLGKGV------KIDG------------------------------ |
| 2Y38 Chain:A ((8-398)) | -GFSLHP---PYFNLAEGARITASATCHPVSNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGR-PGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRD--PTVTRRYYYSIKD----ISIGGRCVCHGHADVCDAK-DPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPAAAH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y38.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147250 for 1408 contacts (-104.6/contact) +
2D Compatibility (PS) -22533 + (NN) 5104 + (LL) 1608
1D Compatibility (HY) -6000 + (ID) 2650
Total energy: -171721.0 ( -121.96 by residue)
QMean score : 0.050
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