Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLYPLLTKTRNTYDLGGIWNFKLGEHNPNELLPSDEVMVIPTSFND-LMVSKEKRDYIGDFWYEKVIEVPKVSEDEEMVLRFGSVTHQAKIYVDGVLVGEHKGGFTPFEVLVPECKYNNEKIKVSICANNVLDYTTLPVGNYSEIIQEDGSIKKKVRENFDFFNYAGVHRPLKLMIRPKNHIFDITIT-------SRLSD-DLQSADLHFLVETNQ--KVDEVRISVFDEDNKL------V--G----ETKDSRLFLSDVHLWE-VLNAYLYTARVEIFVDNQLQDVYEENFGLREIEVT-NGQFLLNRKPIYFKGFGKHEDTFINGRGLNEAANLMDLNLLKDIGANSFRTSHYPYSEEMMRLADRMGVLVIDEVPAVGLFQNFNASLDLSPKDNGTWSLMQTKAAHEQAIQELVKRDKNHPSVVMWVVANEPASHEAGAHDYFEPLVKLYKDLDPQKRPVTLVNILMATPDRDQVMDLVDVVCLNRYYGWYVDHGDLTNAEVGLRKELLEWQDKFPDKPIIITEYGADTLPGLHST------W-NIPYTEEFQCDFYEMSHRVFDGIPNLVGEQVWNFADFETNLMI--LRVQGNHKGLFSRNRQ-PKQVVKEFKKRWMTIPHYHNKKNSVK |
3CMG Chain:A ((2-572)) | -------SLRQDILLNNNWNFRFSHQVQG----DTRRVDLPHTWNAQDALAGKIDYKRGIGNYEKALYIRPEWKGKRLFLRFDGVNSIADVFINRKHIGEHRGGYGAFIFEITDLVKYGEKNSVLVRANNGEQLDIMPL-------------------VGDFNFYGGIYRDVHLLITDETCISPLDYASPGVYLVQEVVSPQEAKVCAKVNLSNRAADGTAELQVLVTDGTKVICKESRNVSLKQGADILEQLPLLIQKPRLWNGCEDPFMYQVSISLHKDGKQIDSVTQPLGLRYYHTDPDKGFFLNGKHLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLAHYPQATYMYDLMDKHGIVTWAEIPFVGPGGY--------AD-KGFVDQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEVGDNPVEYVKELNALAKQEDP-TRPTTSASNQDG-----NLNFITENIAWNRYDGWYGSTP--K----TLATFLDRTHKKHPELRIGISEYGAGASIYHQQDSLKQPSASGWWHPENWQTYYHMENWKIIAERPFVWGTFVWNMFDFGAAHRTEGDRPGINDKGLVTFDRKVRKDAFYFYKANWNKQEPMIYLAEKRC |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192675 for 4605 contacts (-41.8/contact) +
2D Compatibility (PS) -57212 + (NN) -12627 + (LL) 2900
1D Compatibility (HY) -18000 + (ID) 6450
Total energy: -284064.0 ( -61.69 by residue)
QMean score : 0.445
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