Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIILPDLPYAYDALEPHIDAETMTLHHDKHHATYVANANAALEKHPEI-GEDLEALLADVSQIPEDIRQAVINNGGGHLNHALFWELMSPE-ETQISQELSEDINATFGSFEDFKAAFTAAATGRFGSGWAWLVVNAEGKLEVLSTANQDTPIMEGKKPILGLDVWEHAYYLNYRNVRPNYIKAFFEIINWNKVNELYQAAKA
1MNG Chain:B ((6-203))
----LPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKKA--
General information:
TITO was launched using:
RESULT:
Template:
1MNG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109321 for 1541 contacts (-70.9/contact) +
2D Compatibility (PS) -20456 + (NN) -7121 + (LL) 968
1D Compatibility (HY) -21600 + (ID) 5500
Total energy: -163030.0 ( -105.79 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1MNG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MNG-query.scw
PDB file :
Tito_Scwrl_1MNG.pdb
: