Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKAFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH-K-AHDYEEVLEELKSWLIDKSSSKEPL-VQPTLS-SFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGN--KDFNEFATFPT-I----EEAN-HYQLTPEQKAKIK-S-NRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1F07 Chain:A ((1-318)) | MKFGIEFVPN--------EPIEKIVKLVKLAEDVGFEYAWITDHYNN-----KNVYETLALIAEGTETIKLGPGVTNPYVRSPAITASAIATLDELSNGRATLGIGPGD-KA-TFDALGIEWVKPVSTIRDAIAMMRTLLAGEKTESGAQLMGVKAVQEKIPIYMGAQGPMMLKTAGEISDGALINAS---NPK---DFEAAVPLIKEGAEAAGKSIADIDVAAYTCCSIDEDAAAAANAAKIVVAFIAAGSPPPVFERHGLPADTGKKFGELLGKGDFGGAIG-AVDDALMEAFSVVGTPDEFIPKIEALGE-MGVTQYVAGSPIG--PDKEKSIKLLGEVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146357 for 2614 contacts (-56.0/contact) +
2D Compatibility (PS) -32914 + (NN) -18537 + (LL) 1268
1D Compatibility (HY) -3600 + (ID) 2600
Total energy: -202740.0 ( -77.56 by residue)
QMean score : 0.564
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