Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKRITLAVTGSISAYKAADLTSQLTKIGYDVHIIMTQAATEFITPLTLQVLSKNPIHLDVMDEHNPKIINHIELAKRTDLFIVAPASANTIAHLAYGFADNIVTSVALAMPDETPKLIAPAMNTKMYHNTITQRNIDILKKIGYQEIEPRI---SLLACGDTG-QGALADISTILKCIQEVAN
3QJG Chain:A ((5-175))
-GENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDN-Y-YDEFE---DPFLNHVDIANKHDKIIILPATSNTINKIANGICDNLLLTICHTA--FEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVSIYPANISESYELASKTFKKNVVAPEPYKVLEFI-----
General information:
TITO was launched using:
RESULT:
Template:
3QJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128992 for 1367 contacts (-94.4/contact) +
2D Compatibility (PS) -17512 + (NN) -2334 + (LL) 444
1D Compatibility (HY) -12400 + (ID) 2100
Total energy: -162894.0 ( -119.16 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3QJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QJG-query.scw
PDB file :
Tito_Scwrl_3QJG.pdb
: