Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIKLIAVVGPTAVGKTALGIELAKTFNGEIISGDSQQVYQKLDIGTAKASKEEQEQAYHHLIDVREVNENYSVYDFVKEAKVAIDTIISKGKIPIIVGGTGLYLQSLFEGYHLGGEVNQETLKAYREKLESLSDEDLFEKLTEQSIVIPQVN-------RRRAIRALELAKF----GNDLQNS---ESPYDVLLIGLN-DDRQVLYDRINRRVDLMIDNGLLDEAKWLYD-N-Y-PSVQASRGIGYKELFPYFSKQIPLEEAVDKLKQNTRRFAKRQLTWFRNRMNVEFIMVGEENY-QQKIKRKVSDFLSSK |
| 3FOZ Chain:A ((8-311)) | -SLPKAIFLMGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIPLLVGGTMLYFKALLEGLS--PLPSADPEVRARIEQQAAE-QGWESLHRQLQEVDPVAAARIHPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRFHQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVV------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77845 for 2174 contacts (-35.8/contact) +
2D Compatibility (PS) -31432 + (NN) -15301 + (LL) 348
1D Compatibility (HY) -14800 + (ID) 4550
Total energy: -143580.0 ( -66.04 by residue)
QMean score : 0.497
|
|
|