Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIDFRAEVDKRKDALMDDLINLLRINSERDDSQADAEHPFGPGPVKALEFFLEMAERDGYETKNV------------------------DNYAGHFTFGQGEEELGIFGHLDVVPAG--SGWDTDPYEPVIKDNRLYARGSSDDKGPTMACYYALKIIKELGLPTSKKVRFVVGTDEESGWGDMDYYFEHVGLPKPDFGFSPDAEFPIINGEKGNITGYLHFSGENKGAVRLHSFSGGLRENMVPESATARFTSHLDQTTLGASLADFASKHNLKAELSVEDEQYTATVYGKSAHGSTPQEGVNGATYLALYLSQFDFEGPARAFLDVTANIIHEDFSGEKLGVAYEDDCMGPLSMNAGVFQFDE--TN--DDNTIALNFRYPQGTDAKTIQTKLEKLNGVEK----------VTLSDH--EHTPHYVPMDDELVSTLLAVYEKQTGLKGHEQVIGGGTFGRLLE--RGVAYGAMFPGDENTMHQANEYMPLENIFRSAAIYAEAIYELIK |
| 3PFO Chain:A ((14-429)) | -TQSLRAAVDRNFNDQVAFLQRMVQFRSVRGE------------EAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRG-Y-RADACLIPEPTGH----------------------------------T---------------------------LTRAQVGA-----VWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKE--LNAQA----VR--------DPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYG-QGPHAFDERIDLESLRKTTLSIALFVAEWCG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86487 for 3267 contacts (-26.5/contact) +
2D Compatibility (PS) -40687 + (NN) -19159 + (LL) 4096
1D Compatibility (HY) -5200 + (ID) 3250
Total energy: -150687.0 ( -46.12 by residue)
QMean score : 0.415
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