Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIYLGKNTKRNQRLLTFLDSYEIAYTCKESG--DINREVLQSLFSKTSDCFDLL-SPSFLRFKRQN------QMTLSELMNLVLRNPDQNIRLPLVIDKDKVYPDMGVEEARVFIPRRLKVTFFRDSLFCDKEQR
2M46 Chain:A ((1-117))
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGM-LVKRPLAVMGDKITLGFKEDQYKETWLA------------------
General information:
TITO was launched using:
RESULT:
Template:
2M46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56023 for 751 contacts (-74.6/contact) +
2D Compatibility (PS) -11706 + (NN) -5823 + (LL) 1640
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -75162.0 ( -100.08 by residue)
QMean score : 0.413
(partial model without unconserved sides chains):
PDB file :
Tito_2M46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M46-query.scw
PDB file :
Tito_Scwrl_2M46.pdb
: