Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKN-IEVTCLIEEAPQLIALDMTDPLSTAIFAALDYLGKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIGFSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSSGEAVLPFLKELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
2OI2 Chain:A ((4-290)) | ---KVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEV-TCKVVPAESPWRLYEEDTLSMAVYASLEYLNITEACIRCEID----EKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGLDAKTCLSDQPIRFIKNVGFTELEMDLSAYLVIADTGVYGHTREAIQVVQNKGKDALPFLHALGELTQQAEIAISQKDAEGLGQILSQAHLHLKEIGVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159461 for 2555 contacts (-62.4/contact) +
2D Compatibility (PS) -31093 + (NN) -12703 + (LL) 712
1D Compatibility (HY) -32000 + (ID) 8400
Total energy: -242945.0 ( -95.09 by residue)
QMean score : 0.540
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