Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVTSPVFADQTTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTPLVETKPMVEKTLPEQGNYVYSKETEVKNTPSKSAPVAFYAKKGDKVFYDQVFNKDNVKWISYKSFCGVRRYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQGNYTFSHKVEVKNEAKVASPTQFTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQ---PQARITKTGRLTISNETTTGFD---ILITNIKDDNGIAAVKVPVWTEQGGQD-DIKWYTAVTTGDGNYKVAVSFADHKNEKGLYNIHLYYQEASGTLVGVTGTKVTVAGTNSSQEPIENGLAKTGVYNIIGSTEVKNEAKISSQTQFTLEKGDKINYDQVLTADGYQWISYKSYSGVRRYIPVKKLTTSSEKAKDEATKPTSYPNLPKTGTYTFTKTVDVKSQPKVSSPVEFNFQKGEKIHYDQVLVV--DGHQWISYKSYSGIRRYIEI-- |
| 1OKE Chain:A ((1-394)) | MRC--IGISNRDFVEGVSGGSWVDIVLEHGSCVTTMAKNKPTLDFELIKTEAKQ------------------------------------------PATLRKYCIEAKLT--------NTTTESRCPTQGEPTLNEEQDKRFVCKHSMVDRG------WGNGCGL----------------------------FGKGGIVTCAMFTCKKNMEGKIV------------QPENLEYTVVITP----------HSGEEHAV----GNDTGKHGKEVKITPQSSITEAELTGYGTVTMECSPRTGLDFNEMVLLQMKD-------KAWLVHRQWFLDLPLPWLPGADTQGSNWIQKETLVTFKNPHA--------------------KKQDVVVLGSQEGAMHTALT--------GATEIQM-------SSGNLLFTGHLKCRLRMDKLQLKGMSYSMCTG-----KFKVVKEIAETQHGTIVIRVQYEGDGSPCKIPFEIM-DLEKRHVLGRLITVNPIVTEKDSPVNIEAEPPFGDSYIIIGVEPGQLKLNWFKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 108146 for 2924 contacts (37.0/contact) +
2D Compatibility (PS) -40414 + (NN) -1510 + (LL) 8016
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: 57688.0 ( 19.73 by residue)
QMean score : 0.113
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