Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKV-NHRPAMLSTMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLTKRVYGLTFDVGVFLNISPDHIGPIEHP-TFEDYFFHKRLLMENSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSENV-----ITESQA--FSFHVKGKLENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIA-QTTVPGRMEVLTQ--TNGAKIFVDYAHNGDSLKKLLAVVEEH-QKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDP--LVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
| 1J6U Chain:A ((102-433)) | ---------------------------------------------------------------------------------------------------------------KEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVF-LGGIM-----------D-SL--EHGN-----YEKGNGPVVYELDESE---EFFSEFSPNYLIITNARGDHLE--NYGNSLTRYRSAFEKISRNTDLVVTFAEDELTSHLG-------DVTFGVKKGTYTLEMRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHR-------GNFAKALQ--LADEVVVTEVYD-----SGKMIWDSLKSLGK-EAYFVEKLPELEK-VI-SVS-ENTVFLFVGAGDIIYSSRRFVERYQSSK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14016 for 2447 contacts (-5.7/contact) +
2D Compatibility (PS) -29556 + (NN) 6478 + (LL) 11372
1D Compatibility (HY) 11200 + (ID) 1300
Total energy: -15822.0 ( -6.47 by residue)
QMean score : 0.082
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